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    Two Dataset comparison mode
  • Generate Experimental template Save Exp. template
  • Generate Experimental template Save Exp. template


  • Supported by
    Hosted by
By Stuart Cain, Version: 0.17.04-beta
Long report takes several minutes to generate, check GO plots have completed before downloading report
  • Introduction
  • DEP
  • Cluster Analysis
  • Instructions

Chosen Comparisons

Top Table

Exp Table

  • Selected Protein
  • Selected Protein (Dataset 2)
  • Abundance Heatmap
  • Abundance Heatmap (Dataset 2)
  • Volcano plot
  • Volcano plot (Comp2)
  • Significance Counts
  • Significance Counts (Comp2)
  • Result Plots
Save plot
Save plot
Save heatmap
Save Abundance Table
Save heatmap
Save Abundance Table
Save volcano
Save volcano
Save
Save
  • PCA
  • PCA Scree Plot
  • Correlation
  • Freq. Plot
  • PCA (Comp2)
  • PCA Scree Plot (Comp2)
  • Correlation (Comp2)
  • Freq. Plot (Comp2)
  • Correlation Plots
Save Plot Save Values
Save
Save
Save
Save Plot Save Values
Save
Save
Save
  • Protein Numbers
  • Protein Numbers (Dataset 2)
  • Sample coverage
  • Normalization
  • Normalization (Dataset 2)
  • Missing values - Quant
  • Missing values - Heatmap
  • Imputation
  • Imputation (Dataset 2)
  • QC Plots
Save
Save
Save
Save
Save
Save
Save
Save
Save
Save ComplexHeatmap
Save Swatch
  • SAINT Output
  • BFDR Filtering
  • Results
  • Comparison Heatmaps
  • Cluster
  • Enhanced Volcano Plots
  • Box Plots
  • Molecular Function
  • Cellular Components
  • Biological Process
  • BioGrid Interactions
  • STRING Interactions
  • Cluster Analysis Plots
Save SAINTexpress Table 1
Save SAINTexpress Table 2
Save SAINTexpress Table 3
Save SAINTexpress Table 4
Save BFDR Filtered table

Overlap Details

Save Venn Diagram
Save Venn table
Save ComplexHeatmap
Save ComplexHeatmap
Save ComplexHeatmap
Save Cluster Table Save All Clusters
Save volcano
Save volcano
Select Proteins from the list below. You can search for name or cluster number
Save Plot
Warning: This can take a couple of minutes
Save Plot
Save Plot
Download MF Data
Warning: This can take a couple of minutes
Save Plot
Save Plot
Download CC Data
Warning: This can take a couple of minutes
Save Plot
Save Plot
Download BP Data
Warning: This can take a couple of minutes Max limit of 160 significant proteins
This will convert Gene names to uppercase
Save Plot
Download BioGrid Search
Warning: This can take a couple of minutes Max limit of 160 significant proteins
Save Plot
Download STRING Search